STAR mapping ReadAlignChunk_processChunks.cpp:115:processChunks EXITING because of FATAL ERROR in in

因为把双端的read需要判断方向,所以第一步的时候就已经用根据建库的方式,duTP建库第一条链做反向互补,在read后面加上/1,第二条链加上/2,SMART建库的时候,第二条链做反向互补加上/1,第二条链加上/2。因为做这个转化的时候在read名字后面多了一个space号,所以出现了上面类似的问题

@E00511:189:HC3TYCCXY:5:1101:3051:1959/1 

GGGCATGGGATTTACTTATTCAGCAAAGGGTTGCCTTTACCACCCAGAAGGATTTTGGAAGAGAGGCCAGAGAGATAAGATGGGCTCATGCTCAGAGGACTTTGCATGGATTACAACCACCAGACACAAAACTGTTTGGTGACAGAA

+

<F7FJFFJJJAJJJFJJJJJJJJJFAJJJJJJJJJJJJJJJJJFFFFJJJJJA<A<JJJJJJJJJJJJJJJJJJJJJJJJJFJJJJJAJJJFJJJJJJJJFAAJFJFJJJ-FJFJJJ-A-FJJJJJJJJJJJJJJJJFJJFJJJJJJ

@E00511:189:HC3TYCCXY:5:1101:3133:1959/2

GGTGTAGCAGGAACTGGACCGTCCTCCGCGAGGTCTGATAATGCCTCGATTGGTGTATTGCCTGCTAATTTGTCTTCTAATAGAGAGAGCAAGCCCATTTCAGAGAACCCGGAAGAAGAGAACGATGGAGTCCGGGATATTCATGTA

+

FFJAJJJJJJJJJJJJJJJJJJJJJJJJJJJJJFFJJJJJJJJJ7AJJFAFFJJF-FJJJJJJJJ<JJJJJJAJJJJFJJJJJJJJJJJ<JJJFJJJFJJJJJJJJJJFJJJJJJJFAFJJJJJJJJJJJFJJJJJJJJJFJJJJJJ

猜你喜欢

转载自my.oschina.net/u/3722845/blog/1573972
今日推荐