[root@hadoop0 ~]# cd /opt/
[root@hadoop0 opt]# df -h
Filesystem Size Used Avail Use% Mounted on
/dev/mapper/VolGroup-lv_root 18G 9.8G 6.7G 60% /
tmpfs 250M 72K 250M 1% /dev/shm
/dev/sda1 485M 33M 427M 8% /boot
[root@hadoop0 opt]# wget http://mirror.bjtu.edu.cn/cran/src/base/R-3/R-3.0.1.tar.gz
--1999-08-04 18:11:14-- http://mirror.bjtu.edu.cn/cran/src/base/R-3/R-3.0.1.tar.gz
Resolving mirror.bjtu.edu.cn... 202.112.154.58, 2001:da8:205::58
Connecting to mirror.bjtu.edu.cn|202.112.154.58|:80... connected.
HTTP request sent, awaiting response... 200 OK
Length: 25508280 (24M) [application/octet-stream]
Saving to: R-3.0.1.tar.gz?
100%[============================>] 25,508,280 311K/s in 2m 10s
1999-08-04 18:13:24 (192 KB/s) - R--3.0.1.tar.gz saved [25508280/25508280]
[root@hadoop0 opt]# ls
apache-flume-1.6.0-bin
apache-storm-0.9.6.tar.gz
elasticsearch-2.3.3
jdk1.7.0_79
R-3.0.1.tar.gz rh
spark-1.3.1-bin-hadoop2.6
sqoop-1.4.6.bin__hadoop-2.0.4-alpha.tar.gz
apache-flume-1.6.0-bin.tar.gz bigdata
elasticsearch-2.3.3.zip
kafka_2.11-0.9.0.1.tgz
redis-3.2.0
scala-2.10.5
spark-1.3.1-bin-hadoop2.6.tgz
zookeeper-3.4.6.tar.gz
apache-flume-1.6.0-bin.tar.gz.1 data
hadoop-2.7.2.tar.gz ORCLfmap
redis-3.2.0.tar.gz scala-2.10.5.tgz
sqoop-1.4.6
[root@hadoop0 opt]#
[root@hadoop0 opt]# tar -zxvf R-3.0.1.tar.gz
R-3.0.1/VERSION-NICK
tar: R-3.0.1/VERSION-NICK: time stamp 2013-05-06 20:02:06 is 434079738.717527534 s in the future
tar: R-3.0.1: time stamp 2013-05-16 15:11:20 is 434926292.717415555 s in the future
[root@hadoop0 opt]# ls
apache-flume-1.6.0-bin
apache-storm-0.9.6.tar.gz
elasticsearch-2.3.3
jdk1.7.0_79
R-3.0.1
redis-3.2.0.tar.gz
scala-2.10.5.tgz
sqoop-1.4.6
apache-flume-1.6.0-bin.tar.gz
bigdata
elasticsearch-2.3.3.zip
kafka_2.11-0.9.0.1.tgz R-3.0.1.tar.gz rh
spark-1.3.1-bin-hadoop2.6
sqoop-1.4.6.bin__hadoop-2.0.4-alpha.tar.gz
apache-flume-1.6.0-bin.tar.gz.1 data
hadoop-2.7.2.tar.gz ORCLfmap
redis-3.2.0 scala-2.10.5
spark-1.3.1-bin-hadoop2.6.tgz
zookeeper-3.4.6.tar.gz
[root@hadoop0 opt]# cd R-3.0.1
[root@hadoop0 R-3.0.1]# ./configure
checking for fl32... no
checking for af77... no
checking for fc... no
configure: error: No F77 compiler found
[root@hadoop0 R-3.0.1]# yum install gcc-gfortran
[root@hadoop0 R-3.0.1]# ./configure
checking X11/Intrinsic.h usability... no
checking X11/Intrinsic.h presence... no
checking for X11/Intrinsic.h... no
configure: error: --with-x=yes (default) and X11 headers/libs are not available
[root@hadoop0 R-3.0.1]# yum install libXt-devel
[root@hadoop0 R-3.0.1]# ./configure
config.status: creating src/include/config.h
config.status: executing libtool commands
config.status: executing stamp-h commands
R is now configured for i686-pc-linux-gnu
Source directory: .
Installation directory: /usr/local
C compiler: gcc -std=gnu99 -g -O2
Fortran 77 compiler: gfortran -g -O2
C++ compiler: g++ -g -O2
Fortran 90/95 compiler: gfortran -g -O2
Obj-C compiler:
Interfaces supported: X11
External libraries: readline
Additional capabilities: NLS
Options enabled: shared BLAS, R profiling
Recommended packages: yes
configure: WARNING: you cannot build info or HTML versions of the R manuals
configure: WARNING: you cannot build PDF versions of the R manuals
configure: WARNING: you cannot build PDF versions of vignettes and help pages
[root@hadoop0 R-3.0.1]# make
trying to compile and link a JNI progam
detected JNI cpp flags : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux
detected JNI linker flags : -L$(JAVA_HOME)/jre/lib/i386/client -ljvm
make[2]: Entering directory `/tmp/RJRECONF.FOhjZn'
gcc -std=gnu99 -I/opt/R-3.0.1/include -DNDEBUG -I/opt/jdk1.7.0_79/include -I/opt/jdk1.7.0_79/include/linux -I/usr/local/include -fpic -g -O2 -c conftest.c -o conftest.o
gcc -std=gnu99 -shared -L/usr/local/lib -o conftest.so conftest.o -L/opt/jdk1.7.0_79/jre/lib/i386/client -ljvm -L/opt/R-3.0.1/lib -lR
make[2]: Leaving directory `/tmp/RJRECONF.FOhjZn'
Java library path: $(JAVA_HOME)/jre/lib/i386/client
JNI cpp flags : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux
JNI linker flags : -L$(JAVA_HOME)/jre/lib/i386/client -ljvm
Updating Java configuration in /opt/R-3.0.1
Done.
make[1]: Leaving directory `/opt/R-3.0.1'
[root@hadoop0 R-3.0.1]# make install
[root@hadoop0 R-3.0.1]
配置环境变量
JAVA_HOME=/opt/jdk1.7.0_79
STORM_HOME=/opt/bigdata/stomr096
HIVE_HOME=/opt/bigdata/hive2.0
HADOOP_HOME=/opt/bigdata/hadoop272
HBASE_HOME=/opt/bigdata/hbase-1.1.5
R_HOME=/usr/R-3.0.1/lib/R/bin
PATH=$PATH:$JAVA_HOME/bin:$STORM_HOME/bin:$HIVE_HOME/bin:$HADOOP_HOME/bin:$HBASE_HOME/bin:$R_HOME
export JAVA_HOME STORM_HOME HIVE_HOME HADOOP_HOME HBASE_HOME
export PATH
/.bash_profile" 30L, 744C written
[root@hadoop0 R-3.0.1]# source ~/.bash_profile
[root@hadoop0 R-3.0.1]# R
R version 3.0.1 (2013-05-16) -- "Good Sport"
Copyright (C) 2013 The R Foundation for Statistical Computing
Platform: i686-pc-linux-gnu (32-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
Natural language support but running in an English locale
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
>
错误解决方案：
1）make: Warning: File `/usr/src/linux-2.6.35.7-nanosg20/arch/arm/Makefile' has modification time 3.4e+08 s in the f
修改系统时间与server同步：date -s '13:49:00 2014-01-18'
2)./configure 报错
configure: error: No F77 compiler found
解决方法：
yum install gcc-gfortran
3)./configure 报错
configure: error: --with-readline=yes (default) and headers/libs are not available
解决方法：
yum install readline-devel
4）./configure 报错
configure: error: --with-x=yes (default) and X11 headers/libs are not available
解决方法：
yum install libXt-devel
5）./configure 报错
configure: error: C++ preprocessor "/lib/cpp" fails sanity check
解决方法：
yum install gcc-c++ glibc-headers