在VSNI官方论坛 link上,有人咨询能否运行多点试验多性状的因子模型?
问题是:多点试验多性状的因子模型,需要每个性状得到各自的因子模型结果。
答案是:可以运行。
疑问是:这种模型是否有意义?
简单示例如下:
asreml.options(ai.sing=T)
run9<-asreml(cbind(yield,hh1)~trait+trait:Loc,
random=~at(trait):us(trait):fa(Loc,1):Genotype,
residual=~units:us(trait), maxit=10,data=MET)
运行结果如下:
// Var(run9)
at(trait, yield):trait:fa(Loc, 1):Genotype!trait_yield:yield 26.511314673
at(trait, yield):trait:fa(Loc, 1):Genotype!trait_hh1:yield 4.139143529
at(trait, yield):trait:fa(Loc, 1):Genotype!trait_hh1:hh1 6.208715293
at(trait, yield):trait:fa(Loc, 1):Genotype!1!var 0.000000000
at(trait, yield):trait:fa(Loc, 1):Genotype!2!var 0.087426566
at(trait, yield):trait:fa(Loc, 1):Genotype!3!var 0.090362905
at(trait, yield):trait:fa(Loc, 1):Genotype!4!var 0.261599691
at(trait, yield):trait:fa(Loc, 1):Genotype!5!var 0.000001600
at(trait, yield):trait:fa(Loc, 1):Genotype!6!var 0.000001600
at(trait, yield):trait:fa(Loc, 1):Genotype!1!fa1 0.407585698
at(trait, yield):trait:fa(Loc, 1):Genotype!2!fa1 0.394941929
at(trait, yield):trait:fa(Loc, 1):Genotype!3!fa1 0.255072194
at(trait, yield):trait:fa(Loc, 1):Genotype!4!fa1 0.375419515
at(trait, yield):trait:fa(Loc, 1):Genotype!5!fa1 0.301101708
at(trait, yield):trait:fa(Loc, 1):Genotype!6!fa1 0.104013083
at(trait, hh1):trait:fa(Loc, 1):Genotype!trait_yield:yield 6.208715293
at(trait, hh1):trait:fa(Loc, 1):Genotype!trait_hh1:yield 4.139143529
at(trait, hh1):trait:fa(Loc, 1):Genotype!trait_hh1:hh1 0.948916905
at(trait, hh1):trait:fa(Loc, 1):Genotype!1!var 7.445363318
at(trait, hh1):trait:fa(Loc, 1):Genotype!2!var 0.002515794
at(trait, hh1):trait:fa(Loc, 1):Genotype!3!var 0.000000000
at(trait, hh1):trait:fa(Loc, 1):Genotype!4!var 0.000000000
at(trait, hh1):trait:fa(Loc, 1):Genotype!5!var 0.000001600
at(trait, hh1):trait:fa(Loc, 1):Genotype!6!var 2.976343939
at(trait, hh1):trait:fa(Loc, 1):Genotype!1!fa1 -0.793744164
at(trait, hh1):trait:fa(Loc, 1):Genotype!2!fa1 3.816775300
at(trait, hh1):trait:fa(Loc, 1):Genotype!3!fa1 1.643122019
at(trait, hh1):trait:fa(Loc, 1):Genotype!4!fa1 -1.157603387
at(trait, hh1):trait:fa(Loc, 1):Genotype!5!fa1 0.002461397
at(trait, hh1):trait:fa(Loc, 1):Genotype!6!fa1 0.240477558